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Episode 20: Reproducible runtimes with the Tower CLI; new data tools on the Seqera roadmap.

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Manage episode 374232232 series 3394228
Content provided by Seqera. All podcast content including episodes, graphics, and podcast descriptions are uploaded and provided directly by Seqera or their podcast platform partner. If you believe someone is using your copyrighted work without your permission, you can follow the process outlined here https://player.fm/legal.

In this episode of the Channels podcast we have Evan Floden (Seqera Labs CEO) and Harshil Patel (head of scientific development at Seqera Labs) on the show! We talk about: 0:00 - Introduction 1:42 - History of automated testing in nf-core 4:10 - Using Tower CLI with GitHub actions in nf-core 5:09 - Coverage of full-size tests in nf-core 8:00 - Nextflow Tower "pipeline showcase" automation 14:18 - Python library for Tower automation (tw-pywrap) 18:23 - Seqera roadmap: pipeline detail view and run linking 22:06 - Nextflow Tower - Data Explorer 28:01 - Nextflow Tower - Datasets 31:55 - Upcoming events 35:15 - Wrap up

  continue reading

38 episodes

Artwork
iconShare
 
Manage episode 374232232 series 3394228
Content provided by Seqera. All podcast content including episodes, graphics, and podcast descriptions are uploaded and provided directly by Seqera or their podcast platform partner. If you believe someone is using your copyrighted work without your permission, you can follow the process outlined here https://player.fm/legal.

In this episode of the Channels podcast we have Evan Floden (Seqera Labs CEO) and Harshil Patel (head of scientific development at Seqera Labs) on the show! We talk about: 0:00 - Introduction 1:42 - History of automated testing in nf-core 4:10 - Using Tower CLI with GitHub actions in nf-core 5:09 - Coverage of full-size tests in nf-core 8:00 - Nextflow Tower "pipeline showcase" automation 14:18 - Python library for Tower automation (tw-pywrap) 18:23 - Seqera roadmap: pipeline detail view and run linking 22:06 - Nextflow Tower - Data Explorer 28:01 - Nextflow Tower - Datasets 31:55 - Upcoming events 35:15 - Wrap up

  continue reading

38 episodes

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